Find Research Outputs

2018
1 Citations

A Multi-year Search for Transits of Proxima Centauri. I. Light Curves Corresponding to Published Ephemerides

Blank, D. L., Feliz, D., Collins, K. A., White, G. L., Stassun, K. G., Curtis, I. A., Hart, R., Kielkopf, J. F., Nelson, P., Relles, H., Stockdale, C., Jayawardene, B., Pennypacker, C. R., Shankland, P., Reichart, D. E., Haislip, J. B. & Kouprianov, V. V., Jun 1 2018, In : Astronomical Journal. 155, 6, 228

Research output: Contribution to journalArticle

ephemerides
transit
light curve
stars
telescopes
1 Citations

A Mutation in the Borcs7 Subunit of the Lysosome Regulatory BORC Complex Results in Motor Deficits and Dystrophic Axonopathy in Mice

Snouwaert, J. N., Church, R. J., Jania, L., Nguyen, M. T., Wheeler, M. L., Saintsing, A., Mieczkowski, P., Manuel de Villena, F. P., Armao, D., Moy, S. S., Lorenzo, D. N. & Koller, B. H., Jul 31 2018, In : Cell Reports. 24, 5, p. 1254-1265 12 p.

Research output: Contribution to journalArticle

Lysosomes
Mutation
Genes
Axonal Transport
Animals
1 Citations

An Aberrant Microbiota is not Strongly Associated with Incidental Colonic Diverticulosis

Jones, R. B., Fodor, A. A., Peery, A. F., Tsilimigras, M. C. B., Winglee, K., McCoy, A., Sioda, M., Sandler, R. S. & Keku, T. O., Dec 1 2018, In : Scientific Reports. 8, 1, 4951

Research output: Contribution to journalArticle

Colonic Diverticulosis
Microbiota
Diverticulum
Sigmoid Colon
Comamonadaceae

An Adeno-Associated Viral Vector Capable of Penetrating the Mucus Barrier to Inhaled Gene Therapy

Duncan, G. A., Kim, N., Colon-Cortes, Y., Rodriguez, J., Mazur, M., Birket, S. E., Rowe, S. M., West, N. E., Livraghi-Butrico, A., Boucher, R. C., Hanes, J., Aslanidi, G. & Suk, J. S., Jun 15 2018, In : Molecular Therapy - Methods and Clinical Development. 9, p. 296-304 9 p.

Research output: Contribution to journalArticle

Mucus
Genetic Therapy
Dependovirus
Transgenes
Cystic Fibrosis

An Adeno-Associated Virus-Based Toolkit for Preferential Targeting and Manipulating Quiescent Neural Stem Cells in the Adult Hippocampus

Crowther, A. J., Lim, S. A., Asrican, B., Albright, B. H., Wooten, J., Yeh, C. Y., Bao, H., Cerri, D. H., Hu, J., Ian Shih, Y. Y., Asokan, A. & Song, J., Mar 13 2018, In : Stem Cell Reports. 10, 3, p. 1146-1159 14 p.

Research output: Contribution to journalArticle

Dependovirus
Neural Stem Cells
Hippocampus
Cell Lineage
Transgenes
1 Citations

An advance care planning video decision support tool for nursing home residents with advanced dementia: A cluster randomized clinical trial

Mitchell, S. L., Shaffer, M. L., Cohen, S., Hanson, L. C., Habtemariam, D. & Volandes, A. E., Jul 1 2018, In : JAMA Internal Medicine. 178, 7, p. 961-969 9 p.

Research output: Contribution to journalArticle

Advance Care Planning
Nursing Homes
Enteral Nutrition
Dementia
Randomized Controlled Trials

An algorithm-based approach for behavior and disease management in children

Meyer, B. D., Lee, J. Y., Thikkurissy, S., Casamassimo, P. S. & Vann, W. F., Mar 1 2018, In : Pediatric Dentistry. 40, 2, p. 89-92 4 p.

Research output: Contribution to journalArticle

Choice Behavior
Disease Management
Pediatric Dentistry
Dental Care
Quality of Health Care

Analyses of nervous system patterning genes in the tardigrade Hypsibius exemplaris illuminate the evolution of panarthropod brains

Smith, F. W., Cumming, M. & Goldstein, B., Jul 30 2018, In : EvoDevo. 9, 1, 19

Research output: Contribution to journalArticle

Tardigrada
nervous system
Systems Analysis
Nervous System
brain

Analysis-aware microscopy video compression

Shao, C., Cribb, J., Osborne, L. D., O'Brien, E. T., Superfine, R., Mayer-Patel, K. & Taylor, R. M., Jul 1 2018, In : Microscopy Research and Technique. 81, 7, p. 693-703 11 p.

Research output: Contribution to journalArticle

video compression
Video Microscopy
Image compression
Microscopic examination
microscopy
2 Citations

Analysis of collagen and elastin cross-links

Yamauchi, M., Taga, Y., Hattori, S., Shiiba, M. & Terajima, M., Jan 1 2018, Methods in Cell Biology. Academic Press Inc., p. 1-39 39 p. (Methods in Cell Biology; vol. 143)

Research output: Chapter in Book/Report/Conference proceedingChapter

Elastin
Lysine
Collagen
Hydroxylysine
Protein-Lysine 6-Oxidase

Analysis of human C24 bile acids metabolome in serum and urine based on enzyme digestion of conjugated bile acids and LC-MS determination of unconjugated bile acids

Zhu, P., Zhang, J., Chen, Y., Yin, S., Su, M., Xie, G., Brouwer, K. L. R., Liu, C., Lan, K. & Jia, W., Jun 16 2018, (Accepted/In press) In : Analytical and Bioanalytical Chemistry. p. 1-14 14 p.

Research output: Contribution to journalArticle

Metabolome
Bile Acids and Salts
Digestion
Quality of service
Enzymes

Analysis of multiple survival events in generalized case-cohort designs

Kim, S., Zeng, D. & Cai, J., Jan 1 2018, (Accepted/In press) In : Biometrics.

Research output: Contribution to journalArticle

Case-cohort Design
Survival Analysis
Atherosclerosis
Weights and Measures
Weighting

Analysis of risk factors associated with unilateral hearing loss in children who initially passed newborn hearing screening

Appelbaum, E. N., Howell, J. B., Chapman, D., Pandya, A. & Dodson, K. M., Mar 1 2018, In : International Journal of Pediatric Otorhinolaryngology. 106, p. 100-104 5 p.

Research output: Contribution to journalArticle

Unilateral Hearing Loss
Hearing
Newborn Infant
Hearing Loss
Craniofacial Abnormalities

Analysis of threshold stenosis by multiplanar venogram and intravascular ultrasound examination for predicting clinical improvement after iliofemoral vein stenting in the VIDIO trial

Gagne, P. J., Gasparis, A., Black, S., Thorpe, P., Passman, M., Vedantham, S., Marston, W. & Iafrati, M., Jan 1 2018, In : Journal of Vascular Surgery: Venous and Lymphatic Disorders. 6, 1, p. 48-56.e1

Research output: Contribution to journalArticle

Veins
Pathologic Constriction
Phlebography
Area Under Curve
ROC Curve
1 Citations

Analytical and biological variation in repeated sweat chloride concentrations in clinical trials for CFTR modulator therapy

LeGrys, V. A., Moon, T. C., Laux, J., Rock, M. J. & Accurso, F., Jan 1 2018, In : Journal of Cystic Fibrosis. 17, 1, p. 43-49 7 p.

Research output: Contribution to journalArticle

Analyzing the Human Serum Antibody Responses to a Live Attenuated Tetravalent Dengue Vaccine Candidate

Swanstrom, J. A., Henein, S., Plante, J. A., Yount, B. L., Widman, D. G., Gallichotte, E. N., Dean, H. J., Osorio, J. E., Partidos, C. D., De Silva, A. M. & Baric, R. S., May 25 2018, In : Journal of Infectious Diseases. 217, 12, p. 1932-1941 10 p.

Research output: Contribution to journalArticle

Dengue Vaccines
Antibody Formation
Epitopes
Serum
Vaccines

An Animal Model for Genetic Analysis of Multi-Gene Families: Cloning and Transgenesis of Large Tandemly Repeated Histone Gene Clusters

Meers, M. P., Leatham-Jensen, M., Penke, T. J. R., McKay, D. J., Duronio, R. J. & Matera, A. G., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 309-325 17 p. (Methods in Molecular Biology; vol. 1832)

Research output: Chapter in Book/Report/Conference proceedingChapter

Gene Transfer Techniques
Multigene Family
Histones
Organism Cloning
Animal Models

Anatomical Landmark Based Deep Feature Representation for MR Images in Brain Disease Diagnosis

Liu, M., Zhang, J., Nie, D., Yap, P. T. & Shen, D., Sep 1 2018, In : IEEE Journal of Biomedical and Health Informatics. 22, 5, p. 1476-1485 10 p., 8253440

Research output: Contribution to journalArticle

Brain Diseases
Magnetic resonance
Brain
Magnetic Resonance Spectroscopy
Alzheimer Disease
Vocal Cords
Laryngoscopy
Paralysis
Anatomy
Neck

Anatomy-guided joint tissue segmentation and topological correction for 6-month infant brain MRI with risk of autism

Wang, L., Li, G., Adeli, E., Liu, M., Wu, Z., Meng, Y., Lin, W. & Shen, D., Jun 1 2018, In : Human Brain Mapping. 39, 6, p. 2609-2623 15 p.

Research output: Contribution to journalArticle

Autistic Disorder
Anatomy
Joints
Brain
Biomarkers
2 Citations

An attenuated Salmonella enterica serovar Typhimurium strain and galactooligosaccharides accelerate clearance of Salmonella infections in poultry through modifications to the gut microbiome

Azcarate-Peril, M. A., Butz, N., Cadenas, M. B., Koci, M., Ballou, A., Mendoza, M., Ali, R. & Hassan, H., Mar 1 2018, In : Applied and Environmental Microbiology. 84, 5, e02526-17

Research output: Contribution to journalArticle

Digestive system
galactooligosaccharides
bacterial disease
Prebiotics
digestive system

A naturally fluorescent Mgp transgenic mouse for angiogenesis and glaucoma longitudinal studies

Asokan, P., Mitra, R. N., Periasamy, R., Han, Z. & Borrás, T., Feb 1 2018, In : Investigative Ophthalmology and Visual Science. 59, 2, p. 746-756 11 p.

Research output: Contribution to journalArticle

Trabecular Meshwork
Glaucoma
Transgenic Mice
Longitudinal Studies
Vascular Smooth Muscle

And Now, Death by Proton Pump Inhibitor?

Dougherty, M. & Dellon, E. S., Feb 1 2018, In : Gastroenterology. 154, 3, p. 746-747 2 p.

Research output: Contribution to journalComment/debate

Proton Pump Inhibitors

Androgen receptor dampens tissue factor expression via nuclear factor-κB and early growth response protein 1

Hoesel, B., Mussbacher, M., Dikorman, B., Salzmann, M., Assinger, A., Hell, L., Thaler, J., Basílio, J., Moser, B., Resch, U., Paar, H., Mackman, N. & Schmid, J. A. Apr 1 2018 In : Journal of Thrombosis and Haemostasis. 16, 4, p. 749-758 10 p.

Research output: Contribution to journalArticle

Early Growth Response Protein 1
Venous Thromboembolism
Androgen Receptors
Thromboplastin
Prostatic Neoplasms

An Efficient Acyclic Contact Planner for Multiped Robots

Tonneau, S., Prete, A. D., Pettre, J., Park, C., Manocha, D. & Mansard, N., Apr 19 2018, (Accepted/In press) In : IEEE Transactions on Robotics.

Research output: Contribution to journalArticle

Robots
Railroad crossings
Railings
Stairs
Robotics
1 Citations

An efficient hybrid incompressible SPH solver with interface handling for boundary conditions

Takahashi, T., Dobashi, Y., Nishita, T. & Lin, M. C., Jan 1 2018, In : Computer Graphics Forum. 37, 1, p. 313-324 12 p.

Research output: Contribution to journalArticle

Boundary conditions
Fluids
Poisson equation
Linear systems
Hydrodynamics

Anemia and adverse outcomes in a chronic obstructive pulmonary disease population with a high burden of comorbidities an analysis from SPIROMICS

on behalf of the SPIROMICS Investigators, Jun 1 2018, In : Annals of the American Thoracic Society. 15, 6, p. 710-717 8 p.

Research output: Contribution to journalArticle

Chronic Obstructive Pulmonary Disease
Comorbidity
Anemia
Outcome Assessment (Health Care)
Population
5 Citations

An empirical Bayes approach for multiple tissue eQTL analysis

Li, G., Shabalin, A. A., Rusyn, I., Wright, F. A. & Nobel, A. B., Jul 1 2018, In : Biostatistics. 19, 3, p. 391-406 16 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Empirical Bayes
Adaptive Thresholding
Maximum a Posteriori Estimation
Hierarchical Bayesian Model
9 Citations

An epigenetic biomarker of aging for lifespan and healthspan

Levine, M. E., Lu, A. T., Quach, A., Chen, B. H., Assimes, T. L., Bandinelli, S., Hou, L., Baccarelli, A. A., Stewart, J. D., Li, Y., Whitsel, E. A., Wilson, J. G., Reiner1, A. P., Aviv1, A., Lohman, K., Liu, Y., Ferrucci, L. & Horvath, S., Apr 1 2018, In : Aging. 10, 4, p. 573-591 19 p.

Research output: Contribution to journalArticle

Epigenomics
Biomarkers
Interferons
Transcriptional Activation
DNA Damage

A nested case-control study of polychlorinated biphenyls, organochlorine pesticides, and thyroid cancer in the Janus Serum Bank cohort

Lerro, C. C., Jones, R. R., Langseth, H., Grimsrud, T. K., Engel, L. S., Sjödin, A., Choo-Wosoba, H., Albert, P. & Ward, M. H., Aug 1 2018, In : Environmental Research. 165, p. 125-132 8 p.

Research output: Contribution to journalArticle

Polychlorinated Biphenyls
Thyroid Neoplasms
Pesticides
Case-Control Studies
serum

An evidence-based evaluation of contemporary dental ceramics

Donovan, T. E., Alraheam, I. A. & Sulaiman, T. A., Jun 1 2018, In : Dental update. 45, 6, p. 541-546 6 p.

Research output: Contribution to journalArticle

Ceramics
Tooth
Dentition
Esthetics
Publications

An evolving approach to the diagnosis of eosinophilic esophagitis

Kim, H. P. & Dellon, E. S., Jun 1 2018, In : Gastroenterology and Hepatology. 14, 6, p. 358-366 9 p.

Research output: Contribution to journalReview article

Eosinophilic Esophagitis
Proton Pump Inhibitors
Eosinophilia
Eosinophils
Guidelines

A newborn with significant white hyperkeratotic plaques

Ro, T., Blasiak, R. C. & Morrell, D. S., Jan 1 2018, In : Pediatric Dermatology. 35, 1, p. 143-144 2 p.

Research output: Contribution to journalComment/debate

1 Citations

A New Estimate of North American Mountain Snow Accumulation From Regional Climate Model Simulations

Wrzesien, M. L., Durand, M. T., Pavelsky, T. M., Kapnick, S. B., Zhang, Y., Guo, J. & Shum, C. K., Feb 16 2018, In : Geophysical Research Letters. 45, 3, p. 1423-1432 10 p.

Research output: Contribution to journalArticle

Landforms
landforms
Climate models
Budget control
snow water equivalent
1 Citations

A New Look at an Old Cluster: The Membership, Rotation, and Magnetic Activity of Low-mass Stars in the 1.3 Gyr Old Open Cluster NGC 752

Agüeros, M. A., Bowsher, E. C., Bochanski, J. J., Cargile, P. A., Covey, K. R., Douglas, S. T., Kraus, A., Kundert, A., Law, N. M., Ahmadi, A. & Arce, H. G., Jul 20 2018, In : Astrophysical Journal. 862, 1, 33

Research output: Contribution to journalArticle

open clusters
catalogs
stars
star clusters
proper motion

A new preclinical ultrasound platform for widefield 3D imaging of rodents

Czernuszewicz, T. J., Papadopoulou, V., Rojas, J. D., Rajamahendiran, R. M., Perdomo, J., Butler, J., Harlacher, M., O’Connell, G., Zukić, D., Aylward, S. R., Dayton, P. A. & Gessner, R. C., Jul 1 2018, In : Review of Scientific Instruments. 89, 7, 075107

Research output: Contribution to journalArticle

rodents
platforms
Ultrasonics
Imaging techniques
Throughput
1 Citations
Microcephaly
Protein Transport
Brain Neoplasms
Stem Cells
Growth

An Examination of the Perceived Importance and Skills Related to Policies and Policy Making among State Public Health Injury Prevention Staff

Liller, K. D., Chapple-Mcgruder, T., Castrucci, B., Wingate, M. S., Hilson, R., Mendez, D., Cilenti, D. & Raskind, I., Jan 1 2018, In : Journal of Public Health Management and Practice. 24, 1, p. 75-80 6 p.

Research output: Contribution to journalArticle

Policy Making
Public Health
Wounds and Injuries
Health
Health Manpower

An experimentally-calibrated damage mechanics model for stone fracture in shock wave lithotripsy

Fovargue, D., Mitran, S., Sankin, G., Zhang, Y. & Zhong, P., May 1 2018, In : International Journal of Fracture. 211, 1-2, p. 203-216 14 p.

Research output: Contribution to journalArticle

Damage Mechanics
Shock Waves
Shock waves
Microcracks
Mechanics

Angle-based joint and individual variation explained

Feng, Q., Jiang, M., Hannig, J. & Marron, J. S. Jul 1 2018 In : Journal of Multivariate Analysis. 166, p. 241-265 25 p.

Research output: Contribution to journalArticle

Cytology
Angle
Linear algebra
Data structures
Tumors

An image-based small-molecule screen identifies vimentin as a pharmacologically relevant target of simvastatin in cancer cells

Trogden, K. P., Battaglia, R. A., Kabiraj, P., Madden, V. J., Herrmann, H. & Snider, N. T., May 1 2018, In : FASEB Journal. 32, 5, p. 2841-2854 14 p.

Research output: Contribution to journalArticle

Simvastatin
Vimentin
Neoplasms
Pravastatin
Inhibitory Concentration 50
5 Citations

An Immunocompetent Mouse Model of Zika Virus Infection

Gorman, M. J. , Caine, E. A. , Zaitsev, K. , Begley, M. C. , Weger-Lucarelli, J. , Uccellini, M. B. , Tripathi, S. , Morrison, J. , Yount, B. L. , Dinnon, K. H. , Rückert, C. , Young, M. C. , Zhu, Z. , Robertson, S. J. , McNally, K. L. , Ye, J. , Cao, B. , Mysorekar, I. U. , Ebel, G. D. , Baric, R. S. & 4 others Best, S. M., Artyomov, M. N., Garcia-Sastre, A. & Diamond, M. S., Jan 1 2018, (Accepted/In press) In : Cell Host and Microbe.

Research output: Contribution to journalArticle

Interferons
Zika Virus Infection
Zika Virus
Viruses
Interferon-beta

An Initial Psychometric Evaluation of the Joint Attention Protocol

Nowell, S. W., Watson, L. R., Faldowski, R. A. & Baranek, G. T., Jun 1 2018, In : Journal of Autism and Developmental Disorders. 48, 6, p. 1932-1944 13 p.

Research output: Contribution to journalArticle

Autistic Disorder
Psychometrics
Needs Assessment
Research Personnel

An innovative program to support gender equity and success in academic medicine: Early experiences from the doris duke charitable foundation's fund to retain clinical scientists

Jagsi, R., Jones, R. D., Griffith, K. A., Brady, K. T., Brown, A. J., Davis, R. D., Drake, A. F., Ford, D., Fraser, V. J., Hartmann, K. E., Hochman, J. S., Girdler, S., Libby, A. M., Mangurian, C., Regensteiner, J. G., Yonkers, K., Escobar-Alvarez, S. & Myers, E. R., Jul 17 2018, In : Annals of Internal Medicine. 169, 2, p. 128-130 3 p.

Research output: Contribution to journalLetter

Financial Management
Medicine
3 Citations

An integrated clinic-community partnership for child obesity treatment: A randomized pilot trial

Hoffman, J., Frerichs, L., Story, M., Jones, J., Gaskin, K., Apple, A., Skinner, A. & Armstrong, S., Jan 1 2018, In : Pediatrics. 141, 1, e20171444

Research output: Contribution to journalArticle

Pediatric Obesity
Recreation
Therapeutics
Quality of Life
Exercise

An integrated mathematical epithelial cell model for airway surface liquid regulation by mechanical forces

Wu, D., Boucher, R. C., Button, B., Elston, T. & Lin, C. L., Feb 7 2018, In : Journal of Theoretical Biology. 438, p. 34-45 12 p.

Research output: Contribution to journalArticle

cell organelle
Fibrosis
Ion Exchange
Lattice vibrations
cystic fibrosis

An Integrated Scenario Ensemble-Based Framework for Hurricane Evacuation Modeling: Part 2-Hazard Modeling

Blanton, B., Dresback, K., Colle, B., Kolar, R., Vergara, H., Hong, Y., Leonardo, N., Davidson, R., Nozick, L. & Wachtendorf, T., Jan 1 2018, (Accepted/In press) In : Risk Analysis.

Research output: Contribution to journalArticle

Cyclonic Storms
Hurricanes
Hazards
Uncertainty
Physics

An Integrated Scenario Ensemble-Based Framework for Hurricane Evacuation Modeling: Part 1-Decision Support System

Davidson, R. A., Nozick, L. K., Wachtendorf, T., Blanton, B., Colle, B., Kolar, R. L., Deyoung, S., Dresback, K. M., Yi, W., Yang, K. & Leonardo, N., Jan 1 2018, (Accepted/In press) In : Risk Analysis.

Research output: Contribution to journalArticle

Cyclonic Storms
Hurricanes
Decision support systems
Travel time
Uncertainty

An integrated workflow for phenazine-modifying enzyme characterization

Coates, R. C. , Bowen, B. P. , Oberortner, E. , Thomashow, L. , Hadjithomas, M. , Zhao, Z. , Ke, J. , Silva, L. , Louie, K. , Wang, G. , Robinson, D. , Tarver, A. , Hamilton, M. , Lubbe, A. , Feltcher, M. , Dangl, J. L. , Pati, A. , Weller, D. , Northen, T. R. , Cheng, J. F. & 3 others Mouncey, N. J., Deutsch, S. & Yoshikuni, Y., Jul 1 2018, In : Journal of Industrial Microbiology and Biotechnology. 45, 7, p. 567-577 11 p.

Research output: Contribution to journalArticle

Synthetic Biology
Workflow
Multigene Family
Enzymes
Industrial Microbiology

An interdisciplinary perioperative management protocol for patients with sickle cell anemia: A single-surgeon experience

Scarlet, S., Sweeting, R. S., Ataga, K. I., Redding-Lallinger, R. C. & Meyer, A. A., Jun 1 2018, In : American Surgeon. 84, 6, p. 1120-1122 3 p.

Research output: Contribution to journalArticle

Sickle Cell Anemia
Surgeons