• 2784 Citations
  • 13 h-Index
20062018
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Fingerprint Fingerprint is based on mining the text of the experts' scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 25 Similar Profiles
Long Noncoding RNA Medicine & Life Sciences
X Chromosome Inactivation Medicine & Life Sciences
RNA Medicine & Life Sciences
MicroRNAs Medicine & Life Sciences
Genes Medicine & Life Sciences
RNA Sequence Analysis Medicine & Life Sciences
Trophoblasts Medicine & Life Sciences
Stem Cells Medicine & Life Sciences

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Projects 2014 2018

Research Output 2006 2018

  • 2784 Citations
  • 13 h-Index
  • 18 Article
  • 1 Chapter
  • 1 Comment/debate

Functional classification of long non-coding RNAs by k-mer content

Kirk, J. M., Kim, S. O., Inoue, K., Smola, M. J., Lee, D. M., Schertzer, M. D., Wooten, J. S., Baker, A. R., Sprague, D., Collins, D. W., Horning, C. R., Wang, S., Chen, Q., Weeks, K. M., Mucha, P. J. & Calabrese, J. M., Oct 1 2018, In : Nature Genetics. 50, 10, p. 1474-1482 9 p.

Research output: Contribution to journalArticle

Long Noncoding RNA
Licensure
Sequence Homology
Protein Binding
39 Citations

SHAPE reveals transcript-wide interactions, complex structural domains, and protein interactions across the Xist lncRNA in living cells

Smola, M. J., Christy, T. W., Inoue, K., Nicholson, C. O., Friedersdorf, M., Keene, J. D., Lee, D. M., Calabrese, J. M. & Weeks, K. M., Sep 13 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 37, p. 10322-10327 6 p.

Research output: Contribution to journalArticle

Long Noncoding RNA
Protein Interaction Domains and Motifs
RNA
Nucleotides
X Chromosome Inactivation
6 Citations

A survey of imprinted gene expression in mouse trophoblast stem cells

Calabrese, J. M., Starmer, J., Schertzer, M. D., Yee, D. & Magnuson, T., Jan 1 2015, In : G3: Genes, Genomes, Genetics. 5, 5, p. 751-759 9 p.

Research output: Contribution to journalArticle

Trophoblasts
Stem Cells
Gene Expression
Genomic Imprinting
Genes
36 Citations

Detection of RNA-Protein Interactions in Living Cells with SHAPE

Smola, M. J., Calabrese, J. M. & Weeks, K. M., Nov 6 2015, In : Biochemistry. 54, 46, p. 6867-6875 9 p.

Research output: Contribution to journalArticle

Cells
RNA
Proteins
Uncertainty
Mutation
249 Citations

Systematic discovery of Xist RNA binding proteins

Chu, C., Zhang, Q. C., Da Rocha, S. T., Flynn, R. A., Bharadwaj, M., Calabrese, J. M., Magnuson, T., Heard, E. & Chang, H. Y., Apr 9 2015, In : Cell. 161, 2, p. 404-416 13 p.

Research output: Contribution to journalArticle

RNA-Binding Proteins
Untranslated RNA
Long Noncoding RNA
Proteins
Gene Silencing